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Package: raveclusters 0.1.0.9000

Xiang Zhang

raveclusters: Group-level Clustering on 'RAVE' Electrode Signals

More about what it does (maybe more than one line) Use four spaces when indenting paragraphs within the Description.

Authors:Xiang Zhang [cre, aut], Zhengjia Wang [aut]

raveclusters_0.1.0.9000.tar.gz
raveclusters_0.1.0.9000.zip(r-4.7-any)raveclusters_0.1.0.9000.zip(r-4.6-any)raveclusters_0.1.0.9000.zip(r-4.5-any)
raveclusters_0.1.0.9000.tgz(r-4.6-any)raveclusters_0.1.0.9000.tgz(r-4.5-any)
raveclusters_0.1.0.9000.tar.gz(r-4.7-any)raveclusters_0.1.0.9000.tar.gz(r-4.6-any)
raveclusters_0.1.0.9000.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
raveclusters/json (API)

# Install 'raveclusters' in R:

install.packages('raveclusters', repos = c('https://rave-ieeg.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/z94007/raveclusters/issues

Pkgdown/docs site:https://z94007.github.io

On CRAN:

2.70 score 24 exports 215 dependencies

Last updated from:7ada483bab (on rave2.0-pipeline). Checks:1 FAIL, 2 OK, 6 WARNING. Indexed: no.

Target	Result	Time
linux-devel	FAIL	230
source / vignettes	OK	592
linux-release	WARNING	225
macos-release	WARNING	130
macos-oldrel	WARNING	121
windows-devel	WARNING	155
windows-release	WARNING	148
windows-oldrel	WARNING	158
wasm-release	OK	192

Exports:best_criterion best_nclusters build_roi_levels calculate_distance cluster_dendrogram cluster_index cluster_index_methods cluster_mds_plot cluster_membership cluster_mse cluster_on_brain cluster_tree cluster_visualization convert_cluster_table dev_raveclusters find_source import_configurations RAVE_ROI_KEY ravecluster ravecluster_default_opts ravecluster_target_names scan_power_explorer_exports shiny_cex.main table_apply_roi

Dependencies:abind ape askpass backports base64enc base64url BH bidsr bit bit64 bitops boot broom bslib cachem callr car carData checkmate cli cluster clusterCrit codetools colorspace commonmark coro corrplot cowplot cpp11 crayon crosstalk curl data.table dendextend Deriv digest dipsaus doBy dplyr DT dtw ellipse ellmer emmeans estimability evaluate factoextra FactoMineR farver fastmap filearray flashClust fontawesome forecast formatR Formula fracdiff freesurferformats fs fst fstcore future future.apply generics ggplot2 ggpubr ggrepel ggsci ggsignif gifti globals glue gridExtra gsignal gtable hdf5lib here highr htmltools htmlwidgets httpuv httr2 ieegio igraph IRdisplay IRkernel irlba isoband jquerylib jsonlite knitr labeling later lattice lazyeval leaps lifecycle listenv lme4 lmtest logger magrittr MASS Matrix MatrixModels memoise mgcv mime minqa modelr multcompView multitaper mvtnorm nanotime nlme nloptr nnet numDeriv openssl oro.nifti otel parallelly pbdZMQ pbkrtest pillar pkgconfig pkgfilecache png polynom pracma prettyunits processx progressr promises proxy ps purrr quantreg R.matlab R.methodsS3 R.oo R.utils R6 rappdirs rave ravecore ravedash ravepipeline ravetools rbibutils RColorBrewer Rcpp RcppArmadillo RcppCCTZ RcppDate RcppEigen RcppTOML Rdpack readNSx reformulas remotes repr reticulate rlang rmarkdown RNifti RNiftyReg rprojroot rpyANTs rpymat rstatix rstudioapi Rtsne rutabaga S7 sass scales scatterplot3d secretbase servr shidashi shiny shinychat shinyvalidate shinyWidgets showtext showtextdb sourcetools SparseM stringi stringr survival sys sysfonts targets threeBrain tibble tidyr tidyselect timeDate tinytex urca utf8 uuid vctrs viridis viridisLite visNetwork waveslim withr xfun xml2 xtable yaml zoo

Vignette Title

Step 1 | Step 2

Rendered fromA_Quick_Start.Rmdusingknitr::rmarkdown

Last update: 2019-11-08
Started: 2019-11-08

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
Calculate cluster centroid and mean standard error	cluster_mse
Calculate clustering index	best_criterion best_nclusters cluster-index cluster_index cluster_index_methods
Convert 'RAVE' cluster results into a readable table	convert_cluster_table
Function to load all dev funtions and wrap them within an environment	dev_raveclusters
Data import functions used to locate data exported by power explorer module.	find_source import_configurations rave-cluster-data-import scan_power_explorer_exports
Global variables used by 'RAVE' clustering module	raveclusters-globals RAVE_ROI_KEY shiny_cex.main