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Package: raveclusters 0.1.0.9000

Xiang Zhang

raveclusters: Group-level Clustering on 'RAVE' Electrode Signals

More about what it does (maybe more than one line) Use four spaces when indenting paragraphs within the Description.

Authors:Xiang Zhang [cre, aut], Zhengjia Wang [aut]

raveclusters_0.1.0.9000.tar.gz
raveclusters_0.1.0.9000.zip(r-4.7)raveclusters_0.1.0.9000.zip(r-4.6)raveclusters_0.1.0.9000.zip(r-4.5)
raveclusters_0.1.0.9000.tgz(r-4.6-any)raveclusters_0.1.0.9000.tgz(r-4.5-any)
raveclusters_0.1.0.9000.tar.gz(r-4.7-any)raveclusters_0.1.0.9000.tar.gz(r-4.6-any)
raveclusters_0.1.0.9000.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
raveclusters/json (API)

# Install 'raveclusters' in R:

install.packages('raveclusters', repos = c('https://rave-ieeg.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/z94007/raveclusters/issues

Pkgdown/docs site:https://z94007.github.io

On CRAN:

2.70 score 24 exports 253 dependencies

Last updated from:7ada483bab (on rave2.0-pipeline). Checks:7 WARNING, 2 OK. Indexed: no.

Target	Result	Time
linux-devel-x86_64	WARNING	237
source / vignettes	OK	275
linux-release-x86_64	WARNING	303
macos-release-arm64	WARNING	119
macos-oldrel-arm64	WARNING	147
windows-devel	WARNING	175
windows-release	WARNING	139
windows-oldrel	WARNING	155
wasm-release	OK	215

Exports:best_criterion best_nclusters build_roi_levels calculate_distance cluster_dendrogram cluster_index cluster_index_methods cluster_mds_plot cluster_membership cluster_mse cluster_on_brain cluster_tree cluster_visualization convert_cluster_table dev_raveclusters find_source import_configurations RAVE_ROI_KEY ravecluster ravecluster_default_opts ravecluster_target_names scan_power_explorer_exports shiny_cex.main table_apply_roi

Dependencies:abind ape askpass backports base64enc base64url BH bidsr bit bit64 bitops boot brew brio broom bslib cachem callr car carData checkmate cli clipr cluster clusterCrit codetools colorspace commonmark coro corrplot cowplot cpp11 crayon credentials crosstalk curl data.table dendextend Deriv desc devtools diffobj digest dipsaus doBy downlit downloader dplyr DT dtw ellipse ellipsis ellmer emmeans estimability evaluate factoextra FactoMineR fansi farver fastmap fftwtools filearray flashClust fontawesome forecast formatR Formula fracdiff freesurferformats fs fst fstcore future future.apply generics gert ggplot2 ggpubr ggrepel ggsci ggsignif gifti gitcreds globals glue gridExtra gsignal gtable hdf5r here highr htmltools htmlwidgets httpuv httr2 ieegio igraph ini IRdisplay IRkernel isoband jquerylib jsonlite knitr labeling later lattice lazyeval leaps lifecycle listenv lme4 lmtest logger magrittr MASS Matrix MatrixModels memoise mgcv microbenchmark mime miniUI minqa modelr multcompView multitaper mvtnorm nanotime nlme nloptr nnet numDeriv openssl oro.nifti otel pak parallelly pbdZMQ pbkrtest pillar pkgbuild pkgconfig pkgdown pkgfilecache pkgload png polynom pracma praise prettyunits processx profvis progressr promises proxy ps purrr quantreg R.matlab R.methodsS3 R.oo R.utils R6 ragg rappdirs rave ravecore ravedash ravepipeline ravetools rbibutils rcmdcheck RColorBrewer Rcpp RcppArmadillo RcppCCTZ RcppDate RcppEigen RcppTOML Rdpack readNSx reformulas remotes repr reticulate rlang rmarkdown RNifti RNiftyReg roxygen2 rprojroot rpyANTs rpymat rstatix rstudioapi Rtsne rutabaga rversions S7 sass scales scatterplot3d secretbase servr sessioninfo shidashi shiny shinychat shinydashboard shinyFiles shinyjs shinyvalidate shinyWidgets signal sourcetools SparseM startup stringi stringr survival sys systemfonts targets testthat textshaping threeBrain tibble tidyr tidyselect timeDate tinytex urca urlchecker usethis utf8 uuid vctrs viridis viridisLite visNetwork waldo waveslim whisker withr xfun xml2 xopen xtable yaml zip zoo

Vignette Title

Vignette Author

Rendered fromA_Quick_Start.Rmdusingknitr::rmarkdownon Jun 02 2026.

Last update: 2019-11-08
Started: 2019-11-08

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
Calculate cluster centroid and mean standard error	cluster_mse
Calculate clustering index	best_criterion best_nclusters cluster-index cluster_index cluster_index_methods
Convert 'RAVE' cluster results into a readable table	convert_cluster_table
Function to load all dev funtions and wrap them within an environment	dev_raveclusters
Data import functions used to locate data exported by power explorer module.	find_source import_configurations rave-cluster-data-import scan_power_explorer_exports
Global variables used by 'RAVE' clustering module	raveclusters-globals RAVE_ROI_KEY shiny_cex.main